Index

_

_compute_scaling_means() (bedroc.core.DataContainer method) _compute_scaling_stds() (bedroc.core.DataContainer method) _compute_standardized_data() (bedroc.core.DataContainer method)

_get_summary_dataframe() (bedroc.isotope_anomalies.core.GroupData method) _plot_reconstruction() (bedroc.isotope_anomalies.core.GroupData method) _reconstruct_variance_by_feature() (bedroc.pca.PCAFactorAnalyzer method)

A

Analyzer (class in bedroc.pca)

B

bayesian_pca() (in module bedroc.pca) bedroc module bedroc.core module bedroc.hierarchical module

bedroc.isotope_anomalies module bedroc.isotope_anomalies.core module bedroc.pca module bedroc.type_aliases module

C

chondrites (bedroc.isotope_anomalies.core.GroupData attribute)

complex_formatter() (in module bedroc) component_names (bedroc.pca.Analyzer property)

D

data (bedroc.isotope_anomalies.core.GroupData attribute) DATA (in module bedroc.isotope_anomalies.core) data_names (bedroc.core.DataContainer property)

DataContainer (class in bedroc.core) datapath (bedroc.isotope_anomalies.core.GroupData attribute) debug_file_logger() (in module bedroc) debug_logger() (in module bedroc)

E

eigvec_label_offsets (bedroc.isotope_anomalies.core.GroupData attribute) elements (bedroc.isotope_anomalies.core.GroupData attribute)

explained_variance_ratio_by_factor() (bedroc.pca.PCAFactorAnalyzer method) explained_variance_ratio_by_feature() (bedroc.pca.PCAFactorAnalyzer method) explained_variance_ratio_total() (bedroc.pca.PCAFactorAnalyzer method)

F

feature_centric_hierarchical_model() (in module bedroc.hierarchical) feature_columns (bedroc.core.DataContainer property) feature_names (bedroc.core.DataContainer property) (bedroc.pca.Analyzer property)

feature_offsets (bedroc.hierarchical.SyntheticDataGenerator attribute) feature_sigma (bedroc.hierarchical.SyntheticDataGenerator attribute) feature_std_columns (bedroc.core.DataContainer property) from_csv() (bedroc.core.DataContainer class method) from_excel() (bedroc.core.DataContainer class method)

G

generate() (bedroc.hierarchical.SyntheticDataGenerator method) generate_out_of_sample_data() (bedroc.hierarchical.SyntheticDataGenerator method) get_color() (in module bedroc.isotope_anomalies.core) get_coords() (in module bedroc.hierarchical) get_covariance_matrix() (bedroc.core.DataContainer method)

get_dataframe() (bedroc.core.DataContainer method) get_destandardized_values() (bedroc.core.DataContainer method) get_feature_stds() (bedroc.core.DataContainer method) get_feature_values() (bedroc.core.DataContainer method) get_group_data() (in module bedroc.isotope_anomalies.core) GroupData (class in bedroc.isotope_anomalies.core)

I

idata (bedroc.isotope_anomalies.core.GroupData property)

is_vesta_group() (in module bedroc.isotope_anomalies.core)

L

label_offsets (bedroc.isotope_anomalies.core.GroupData attribute)

M

model (bedroc.isotope_anomalies.core.GroupData property) module bedroc bedroc.core bedroc.hierarchical bedroc.isotope_anomalies bedroc.isotope_anomalies.core bedroc.pca bedroc.type_aliases

mu_A (bedroc.hierarchical.SyntheticDataGenerator attribute) mu_B (bedroc.hierarchical.SyntheticDataGenerator attribute)

N

n_components (bedroc.pca.PCAFactorAnalyzer property) n_data (bedroc.core.DataContainer property) (bedroc.pca.PCAFactorAnalyzer property) n_features (bedroc.core.DataContainer property) (bedroc.hierarchical.SyntheticDataGenerator attribute) (bedroc.pca.PCAFactorAnalyzer property)

n_samples (bedroc.hierarchical.SyntheticDataGenerator attribute) (bedroc.pca.PCAFactorAnalyzer property) name (bedroc.isotope_anomalies.core.GroupData attribute)

O

observed_variance_by_feature() (bedroc.pca.PCAFactorAnalyzer method)

output_directory (bedroc.hierarchical.SyntheticDataGenerator attribute)

P

PCAFactorAnalyzer (class in bedroc.pca) plot_explained_variance_by_factor() (bedroc.pca.Analyzer method) plot_explained_variance_by_feature() (bedroc.pca.Analyzer method)

plot_pca() (bedroc.isotope_anomalies.core.GroupData method) plot_pearson_correlation_coefficient() (bedroc.core.DataContainer method) plot_predicted_observations() (bedroc.isotope_anomalies.core.GroupData method) plot_reconstructed_observations() (bedroc.isotope_anomalies.core.GroupData method)

R

random_seed (bedroc.hierarchical.SyntheticDataGenerator attribute) RANDOM_SEED (in module bedroc.hierarchical)

reconstruct_data() (bedroc.pca.PCAFactorAnalyzer method) resolve_path() (in module bedroc.core) run_bayesian_pca() (bedroc.isotope_anomalies.core.GroupData method)

S

SAVEFIG_KWARGS (in module bedroc.hierarchical)

simple_formatter() (in module bedroc) SyntheticDataGenerator (class in bedroc.hierarchical)

T

to_excel() (bedroc.isotope_anomalies.core.GroupData method) to_pickle() (bedroc.isotope_anomalies.core.GroupData method)

train_test_split() (bedroc.core.DataContainer method) trim_samples() (in module bedroc.core)

X

X (bedroc.hierarchical.SyntheticDataGenerator property)

X_group_idx (bedroc.hierarchical.SyntheticDataGenerator property)

Z

zero_difference_model() (in module bedroc.hierarchical)